PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015871156.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family C2H2
Protein Properties Length: 402aa    MW: 43966.8 Da    PI: 9.5972
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015871156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032167189223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      C+ Cg++F+  ++L+ H+ + H
  XP_015871156.1 167 ACSQCGEVFPKIESLELHQAVrH 189
                     6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.808166194IPR007087Zinc finger, C2H2
PROSITE patternPS000280166189IPR007087Zinc finger, C2H2
SuperFamilySSF563992.49E-24191398No hitNo description
Gene3DG3DSA:3.90.228.103.1E-13193398IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MALLTFVPEA TTESKKSPPS KRQRKQSKQQ RKPQSSWDQI KNLLTCKQIE GSRVHDPSKN  60
PTAYSKLGSS CSSICSFRDV VHGNSRVVHR ADNSPESSSV GQETRLLNRK AEASKSSSTR  120
SLSRSNGGTA YTSSSRGMQF RKLSGCYECH MIVDPSRYPV ARSTICACSQ CGEVFPKIES  180
LELHQAVRHA VSELGPEDSG RNIVEIIFKS SWLKKDNPIF KIERILKVHN TQRTIQRFED  240
CRDAVKTRAL NSTRKNPRCA ADGNELLRFH CTTISCALGA RGASSLCGSV PGCGVCTIVR  300
HGFQGKAGGE SKGVRTTASS GRAHDSLRCT DGRRAMLVCR VIAGRVKRNA DDAPPEEDGL  360
SAGSYDSVAG YTGIYSNLEE LILFNPKAIL PCFVVIYEAL ES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015871156.10.0PREDICTED: uncharacterized protein LOC107408289
RefseqXP_015902946.10.0PREDICTED: uncharacterized protein LOC107435832
TrEMBLW9RZ950.0W9RZ95_9R
STRINGVIT_18s0001g14130.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-171C2H2-like zinc finger protein